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DFO PhD Proposal Defense: 12/4 – Kamran Walsh

“Quantitative Decision Support Tools for Improving Recreational Fisheries Assessment and Management in the Northeast United States”

By: Kamran Walsh

Advisor
Gavin Fay (UMass Dartmouth)

Committee Members
Steven X. Cadrin (UMass Dartmouth), Lauran Brewster (UMass Dartmouth), and Samuel Truesdell (NOAA Northeast Fisheries Science Center)

Thursday December 4, 2025
09:00 AM
SMAST East 101-103
836 S. Rodney French Blvd, New Bedford
and via Zoom

Abstract:

Marine recreational fisheries play important roles in shaping the population dynamics of exploited species, yet are underrepresented in fisheries research compared to commercial and are subject to unique challenges. There is subsequently a need to strengthen assessment and management practices for recreationally important fish stocks. This dissertation aims to develop and test computational decision support tools that help identify effective recreational fisheries management strategies, better account for uncertainty in recreational fisheries discard data, and improve understanding of how socioeconomic indicators impact recreational fisheries outcomes. I will first review and synthesize available literature to aggregate information on Northeast U.S. recreational fisheries and the risks they face. I will then expand upon a Summer Flounder (Paralichthys dentatus) Management Strategy Evaluation (MSE) to test the performance of management decisions on the biological and socioeconomic productivity of this economically and culturally important recreational fishery. Following this, a recently-developed functionality of the Woods Hole Assessment Model (WHAM) that internally estimates time-varying growth will be leveraged to determine if state-space stock assessment models that directly fit to length-based recreational discard data provide more robust inference than age-structured methods. Lastly, I will incorporate socioeconomic indicators of recreational catch and effort into stock assessment models to assess how socioeconomic factors affect recreational fishery discards. This dissertation ultimately seeks to support the sustainable management of ecologically and economically important marine recreational fisheries.


Join via Zoom

https://umassd.zoom.us/j/99199876170

Meeting ID: 991 9987 6170

Passcode: 806701

DFO Seminar – November 5th

 

Abstract:

The Northeast Skate Complex Management Plan was established in 2003 with a primary objective of rebuilding four overfished skate populations in the northeastern US. One of those overfished species, the thorny skate (Amblyraja radiata), had experienced a nearly 90% decline in abundance since the 1960s and was placed under a harvest moratorium to drastically reduce fishing mortality. Around the same time that the moratorium was implemented, research on thorny skate commenced in the Gulf of Maine with the aim of collecting biological and ecological data that will inform decisions on population recovery. However, over two decades later, while all three other overfished skate species have been fully rebuilt, thorny skate remains under a moratorium, and their biomass is presently near an all-time low. Facing failed rebuilding, managers and fishery scientists are now posed with new questions around why the thorny skate population has not responded more positively to decreased fishing mortality and what to do moving forward. New data from long-term tagging and genetics studies have finally provided some answers to these questions, but the answers might make future management of the Skate Complex more complex.


Join via Zoom!

https://umassd.zoom.us/j/93758230260

Meeting ID: 937 5823 0260

Passcode:426839

DEOS Seminar – November 5th

Abstract:

The NSF Ocean Observatories Initiative (OOI) operates and maintains sophisticated arrays of instruments to collect and distribute research quality data to users. These time series provide insights into the Earth, ocean, and atmosphere for scientists, educators, students, and policy makers charged with the stewardship of our ocean. The time series come from seven arrays operated and maintained in demanding locations (mid-to high-latitudes) for over a decade. The arrays include global arrays in the Irminger Sea, Gulf of Alaska, Argentine Basin and the Southern Ocean, as well as coastal arrays off the US east and west coasts. These arrays are comprised of instrumented surface and subsurface moorings, profilers, instrumented anchors, AUVs, gliders, and a network of cables providing power and two-way communication to instrumented seafloor nodes and profiler moorings.

This talk will provide an update on the OOI and how anyone can access ten-years of data for scientific research. The majority of the talk will focus on turbulent flux data collected with the Direct Covariance Flux Systems (DCFS aka FDCHP) on the OOI global and coast moorings to investigate air-sea exchange under moderate to high wind conditions. These systems remove platform motion from the measured wind components using 3-axis sonic anemometers, angular rate sensors, linear accelerometers and a compass. The DCFS has evolved to include real-time processing of the data, and telemetry of the processed fluxes and associated means to shore. This provides research quality data in near real-time. The DCFS has also been combined with fast-response infrared hygrometers during the NASA’s SPURS and the INCOIS field programs to directly measure the latent heat flux.

These measurements are extremely useful in process studies that investigate the exchange of momentum, heat and mass across the coupled boundary layers with a key application being improvement of bulk flux parameterizations. These bulk flux parameterizations find wide use in numerical modeling, oceanic process studies, and globally gridded air-sea flux products that combine bulk parameterizations with in situ and satellite data. The ever increasing number of high-quality near surface flux observations has led to improved understanding of air-sea exchange under high wind and sea-states. Most recently, this has included investigations of the role played by evaporating sea-spray on air-sea exchange, and improvements to wave-based parameterization of momentum exchange at high winds. This talk will describe how these observational advances are being used to improve our understanding of air-sea interaction under a wide-variety of wind and sea-states.


Join via Zoom!

https://umassd.zoom.us/j/97440069270

Meeting ID: 974 4006 9270

Passcode: 428029

DFO Seminar – October 22

Abstract:

Regulations and a strong conservation ethic among anglers make Striped Bass among the most frequently released coastal marine fishes. Given the currently assumed 9% release mortality rate, these recreational releases account for the majority of human removals from the stock. In an attempt to reduce this mortality rate, fishery managers have recently begun requiring that anglers use circle hooks when fishing with natural baits for Striped Bass. To measure the reduction in release mortality resulting from this rule change, we conducted a two-year acoustic telemetry experiment (n = 349 fish) to compare the survival of bass caught via circle hooks and conventional J-hooks. This telemetry dataset was also used to estimate mortality rate as a function of a release “condition score”, which is a simple visual assessment of the injury and vitality of released fish. By combining these telemetry results with fishery observations of release condition from a citizen science project (n = 8,349 fish), a machine learning model was developed to predict mortality rate from a suite of biological, environmental, and fishing variables. This model was then used to generate an updated comprehensive estimate of release mortality rate by accounting for fishery-wide patterns in the suite of predictors. Although we found that circle hooks did not provide a conservation benefit for Striped Bass, our results demonstrate that release mortality for the recreational fishery is on average 4%, which is less than half of the currently assumed rate. Furthermore, a significant positive relationship between mortality rate and fish size suggests that fishery removals are more focused on older fish than previously thought.

 


 

Join on Zoom!

https://umassd.zoom.us/j/93758230260

Meeting ID: 937 5823 0260

Passcode:426839

DEOS Seminar – October 22

Abstract:

Harmful algal blooms (HABs) in the Alaskan Arctic pose severe risks to the ecosystem health and human populations in the region. Historically, the Pacific Arctic has been considered too cold for these organisms to form recurring blooms. However, both locally originating and remotely advected HABs have recently been documented in the Chukchi Sea. In summer 2022, a widespread and toxic bloom of Alexandrium catenella was measured in the northern Bering and Chukchi Seas during two back-to-back research cruises. In this seminar I will share the results from an interdisciplinary biophysical study where we addressed the following main questions: where did the bloom come from? How did the physical properties modulate the initiation, growth and spread of the bloom? To answer these questions, we used shipboard hydrographic and velocity data, together with ocean reanalysis fields.

 


Join on Zoom!

https://umassd.zoom.us/j/97440069270

Meeting ID: 974 4006 9270

Passcode: 428029

Name the Blue Lobster!

Doctoral Proposal Defense – Parth Sastry

EAS Doctoral Proposal Defense
by Parth Sastry
Date:  Thursday, November 6, 2025
Time: 1:00pm
Topic:  Mesoscale Eddies and Tracer Transports Into the Eastern Tropical Pacific Oxygen Deficient Zone
Location:  SMAST East 101-103
                           Meeting ID: 959 4416 7939
Passcode: 222984

Abstract:     
Oxygen deficient zones (ODZs) are biogeochemically relevant regions of interest, characterized by very low to undetectable oxygen concentrations within the water column. They are found in all the world’s oceans, with the largest being in the eastern tropical Pacific (ETP). In conjunction, the region is home to a rich mesoscale eddy field, assumed to be associated with frequent wind jet events over the Gulf of Tehuantepec along with instabilities in the larger circulation. These wind events drive upwelling over the ocean, causing cold, dense, nutrient-rich waters to be oxygenated, potentially
being a significant source of oxygen into the ODZ.
A landmark study in 2015 by Cole et al. utilized information from Argo profiles – analyzing salinity anomalies – to obtain estimates of horizontal eddy di!usivities throughout the global ocean. These estimates help us account for smaller scale mixing processes a!ecting tracers in models, including oxygen. In the first part of the thesis, we improve upon this previous study by deriving a method to obtain a lower bound for horizontal eddy di!usivity via analyzing profiles within mesoscale eddies utilizing our knowledge of the eddy tracks to constrain observed salinity anomalies to a purely local-stirring induced anomaly. Hence, our analysis accounts for advective contributions to these anomalies and shows a reduction compared to di!usivities in the previous study. We still observe an elevated band of di!usivities along the “eddy alley” in the ETP – of the order of 5 → 103 m2s→1 – showcasing agreement with estimates from other studies that parameterize di!usivities. However, this estimate is still higher than what is used in common global climate models – leading them to potentially underestimate the oxygen flux into the ODZ.
Coastal waters in the region are more oxygenated than waters further out in the open ocean. Mixing of local climatological oxygen gradients by mesoscale eddies is one component of oxygen transport into the ODZ, which we quantify in the second chapter via our obtained di!usivity estimates. The aforementioned upwelling events are another source of oxygen. They oxygenate cold, dense water which then subducts into the ODZ. We propose to examine the statistics and nature of upwelling events via sea surface temperature maps from reanalysis products to quantify the amount of oxygen that gets transported cross-shelf as a consequence of these events. This analysis could examine whether wind-driven upwelling is a significant source of oxygen for the deeper waters of the ODZ. We also examine and diagnose particular upwelling events with models like HYCOM, to quantify the fraction of oxygenated water that gets advected to the ODZ, compared to along the coast – giving us better estimates of net oxygen transport. We seek to answer three key questions in this chapter – 1) How significant are upwelling events compared to local stirring in cross-shelf oxygen transport into the ODZ?, 2) Do high-resolution ocean models capture upwelling events as an oxygen source in the region? and 3) How do model computations of net oxygen transport compare with our estimates?
The mesoscale eddies observed in this region have a statistically significant relationship with the Tehuantepecer, a mountain-gap wind travelling through the Chivela pass and passing over the Gulf of Tehuantepec, that can often reach storm intensities. Our aim for the final part of the thesis is to investigate, via a hierarchy of increasingly complex ocean models in the Julia software package ClimaOcean, the generation and evolution mechanism of these eddies. A previous study utilizing the Regional Ocean Modeling System (ROMS) to model the region, showed that the predominant source of eddy kinetic energy (EKE) in the region are instabilities of the mean seasonal circulations and not transient wind work. This conclusion was drawn purely from a EKE budget analysis and did not analyze the generation mechanism of these eddies. We wish to examine, via process studies, what local processes drive eddy generation and whether they can explain observed asymmetries among anticyclones/cyclones in stability and size.
ADVISOR(s):  Dr. Amit Tandon, Department of Estuarine and Ocean Sciences, SMAST
                                                          (atandon@umassd.edu)
COMMITTEE MEMBERS:  Dr. Mark Altabet, Dept. of Estuarine and Ocean Sciences, SMAST
                                                           Dr. Geoffrey Cowles, Dept. of Fisheries Oceanography, SMAST
                                                           Dr. Eric D’Asaro, Applied Physics Laboratory, University of Washington
NOTE: All EAS Students are ENCOURAGED to attend.
                        Contact abedard1@umassd.edu for any questions.

DEOS Seminar: October 15

 

 

Abstract:

Spectral surface wave models predict the wave action evolution of multiple wave components. It is well understood that the group speed of the wave action of a particular wave component is modified if an Eulerian near-surface current exists. However, a typical ocean wave field also introduces a significant integrated Stokes drift or Lagrangian mass transport and its impact on the group speed of a particular wave component is not well known. In this study the wave evolution equations are derived in the presence of two wave trains and the impacts of one wave train on the phase and group speeds of the other wave train are investigated. The results are extended to estimate the impact of the entire wave spectrum on the propagation of a particular wave train. It is found that the group speed of the dominant waves can be significantly enhanced by the presence of other waves by up to 0.3–0.4 m/s or 4%–5% in strongly wind-forced conditions under tropical cyclones. This increase of the group speed is almost twice as large as the advection by a sheared current with the same profile as the Stokes drift integrated over the wave spectrum. Introducing this enhanced group speed in the wave models may make a noticeable impact on their surface wave predictions. It is also found that the increase of the phase speed of a particular wave component is much larger than the advection by a sheared current with the same profile as the integrated Stokes drift.


Join via Zoom!

https://umassd.zoom.us/j/97440069270

Meeting ID: 974 4006 9270

Passcode: 428029

DFO Seminar: October 15

Abstract:

Established in 2002, the Northeast Seafood Coalition is a non-profit organization that represents commercial ground fishing entities in the northeastern United States on political and policy issues.  NSC strives to find creative solutions that work to rebuild fish stocks while preserving family-owned fishing businesses and a diverse groundfish fleet.

On behalf of its members, NSC directly engages in the stock assessment and policy-making processes.  Federal fisheries management operates under open meeting and public involvement laws, primarily the Magnuson-Stevens Fishery Conservation and Management Act (MSA).  Transparency and public participation, with opportunities for written and oral comment, are requirements under Fishery Management Council system and the Administrative Procedures Act.  NSC actively engages in this public process by offering fishery expertise; prepares oral and written comments; and working to inform the scientific and management community on essential information concerning the operations and performance of the fishery.

Over the years, groundfish science and management have encountered significant transitions. Of the most noteworthy was the transition from input control (e.g., days at sea management regime) to an output control (e.g., groundfish sectors) in 2010.  To comply with new 2006 Magnuson mandates related to annual catch limits and accountability measures, the commercial groundfish fishery transitioned to a sector allocation and management program, known as a catch-share program. The policy development work was extensive and the allocation process, with the move to groundfish sectors, was highly contentious and remains so to this day.

Fifteen years after the inception of sectors, the Council will now be grappling with how to implement an updated scientific understanding of the stock structure of Atlantic cod under the sector allocation and management regime.  Transitioning from two to four Atlantic cod stocks will be a monumental undertaking for managers and will directly impact permit holders.  Although cod has become incidental catch on groundfish trips, access to cod quota is essential to making profitable groundfish trips.  Lease prices have been high on cod and are anticipated to grow as quotas remain low and cod remains available despite low estimated biomass.

This next phase of groundfish management will represent a significant pivot for the groundfish fishery.  It will be a critical time for engagement by the Northeast Seafood Coalition.


Join via Zoom!

https://umassd.zoom.us/j/93758230260

Meeting ID: 937 5823 0260

Passcode:426839

 

Fishing Partnership Training – October 16&17

Safety and Drill Outreach Flyer EDITABLE

 

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